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[1]
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M. Xu.
Superposition rule for light scattering by a composite particle.
Opt. Lett., 31:3223-3225, 2006.
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[2]
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M. Alrubaiee, M. Xu, S. K. Gayen, and R. R. Alfano.
Localization and cross section reconstruction of fluorescent targets
in ex vivo breast tissue using independent component analysis.
Appl. Phys. Lett., 89:133902, 2006.
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[3]
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M. Xu, M. Alrubaiee, S. K. Gayen, and R. R. Alfano.
Three-dimensional localization and optical imaging of objects in
turbid media using independent component analysis.
Appl. Opt., 44:1889-1897, 2005.
[ .pdf ]
A new approach for optical imaging and localization of
objects in turbid media that makes use of the independent
component analysis (ICA) from information theory is
demonstrated. Experimental arrangement realizes a
multi-source illumination of a turbid medium with embedded
objects, and a multi-detector acquisition of transmitted
light on the medium boundary. The resulting spatial
diversity and multiple angular observations provide robust
data for three-dimensional localization and
characterization of absorbing and scattering
inhomogeneities embedded in a tissue-like turbid medium.
ICA of the perturbations in the spatial intensity
distribution on the medium boundary sorts out the embedded
objects and their locations are obtained from Green's
function analysis based on any appropriate light
propagation model. Imaging experiments were carried out on
two human breast tissue simulating homogeneous turbid media
of thickness approximately 50 times the transport mean free
path of the medium with two embedded absorptive objects in
one, and four scattering objects in the other. An
independent component separation of the signal, in
conjunction with diffusive photon migration theory was used
to locate the embedded inhomogeneities. In both the cases,
improved lateral and axial localization of the objects over
the result obtained using common photon migration
reconstruction algorithms were achieved. The approach is
applicable for different medium geometries, can be used
with any suitable photon propagation model, and is amenable
to near real time imaging applications.
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[4]
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M. Xu, M. Alrubaiee, S. K. Gayen, and R. R. Alfano.
Optical imaging of turbid media using independent component analysis:
Theory and simulation.
J. Biomed. Opt., 10:051705, 2005.
A new imaging approach for three-dimensional localization
and characterization of objects in a turbid medium using
independent component analysis (ICA) from information
theory is developed and demonstrated using simulated data.
This approach uses a multi-source and multi-detector signal
acquisition scheme. Independent component analysis of the
perturbations in the spatial intensity distribution
measured on the medium boundary sorts out the embedded
objects. The locations and optical characteristics of the
embedded objects are obtained from a Green's function
analysis based on any appropriate model for light
propagation in the background medium. This approach is
shown to locate and characterize absorptive and scattering
inhomogeneities within highly scattering medium to a high
degree of accuracy. In particular, we show this approach
can discriminate between absorptive and scattering
inhomogeneities, and can locate and characterize complex
inhomogeneities which is both absorptive and scattering.
The influence of noise and uncertainty in background
absorption or scattering on the performance of this
approach is investigated.
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[5]
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M. Xu and R. R. Alfano.
Random walk of polarized light in turbid media.
Phys. Rev. Lett., 95:213905, 2005.
We study the propagation of polarized light in turbid
media as a random walk of vector photons. The second order
statistics of the polarization and propagation directions
of polarized light vs the number n of scattering events
in the direction space is shown to be characterized by two
eigenvalues λ for Mie scatterers of arbitrary
size and refractive index. Both light polarization and
directionality anisotropies decay as a powerlaw of the
larger eigenvalue λ+n when
n1/ln(λ+)/(λ-). The
characteristic length for polarized light to become
isotropic in its linear polarization and propagation
directions is given by
lp=ls/ln(1)/(λ+) where ls is the
scattering mean free path.
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[6]
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M. Xu and R. R. Alfano.
Fractal mechanisms of light scattering in biological tissue and
cells.
Opt. Lett., 30:3051-3053, 2005.
We use fractal continuous random media to model visible
and near infrared light scattering by biological tissue and
cell suspensions. The powerlaw of the reduced scattering
coefficient, the anisotropy factor of scattering, and the
phase function are derived with good agreement with
experimental results. Implications on spectroscopic tissue
diagnosis are discussed.
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[7]
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M. Xu and R. R. Alfano.
Circular polarization memory of light.
Phys. Rev. E, 72:065601(R), 2005.
We study the circular polarization memory of light
multiply scattered by Mie particles of arbitrary size and
refractive index. The loss of helicity of multiply
scattered light is shown to be characterized by one
parameter λx taking into account of both
mechanisms (randomization of direction and randomization of
helicity) for circular depolarization. The decay of
helicity asymmetry follows a powerlaw λxn
with the increase of the number n of scattering events
when n1. The characteristic length for circular
polarized light to lose its helicity is given by
lx=ls/ln(1)/(λx) where ls is the
mean scattering free path.
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[8]
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Kevin G. Phillips, Min Xu, S. K. Gayen, and R. R. Alfano.
Time-resolved ring structure of circularly polarized beams
backscattered from forward scattering media.
Opt. Express, 13:7954-7969, 2005.
[ .pdf ]
The backscattering of circularly polarized light at normal
incidence to a half-space of scattering particles is
studied using the Electric Field Monte Carlo (EMC) method.
The spatial distribution of the backscattered light
intensity is examined for both the time-resolved and
continuous wave cases for large particles with anisotropy
factor, g, in the range 0.8 to 0.97. For the
time-resolved case, the backscattered light with the same
helicity as that of the incident beam (co-polarized) is
found to form a ring centered on the point of incidence.
The ring expands and simultaneously grows weak as time
increases. The intensity of backscattered light with
helicity opposite to that of the incident beam
(cross-polarized) is found to exhibit a ring behavior for
g >=0.85, with significant backscattering at the point
of incidence. For the continuous-wave case no such ring
pattern is observed in backscattered light for either
helicity. The present EMC study suggests that the ring
behavior can only be observed in the time domain, in
contrast to previous studies of light backscattered from
forward scattering media based on the scalar
time-independent Fokker-Planck approximation to the
radiative transfer equation. The time-dependent ring
structure of backscattered light may have potential use in
subsurface imaging applications.
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[9]
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A. Katz, Alexandra Alimova, M. Xu, Paul Gottlieb, Elizabeth Rudolph,
J. C. Steiner, and R. R. Alfano.
In Situ determination of refractive index and size of
Bacillus spores by light extinction.
Opt. Lett., 30:589-591, 2005.
[ .pdf ]
Light extinction measurements in the wavelength range of
400 to 1000 nm were performed in situ, on Bacillus subtilis
endospores during heat shock induced activation.
Simultaneous information on particle size and refractive
indices during activation were calculated from the
transmission spectra using the Gaussian Ray Approximation
of anomalous diffraction theory. During activation, the
refractive index of the core decreased from 1.51 to 1.39.
while the size increased from 0.38 to 0.6 μm.
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[10]
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W. Cai, M. Xu, and R. R. Alfano.
Analytical form of the particle distribution based on the cumulant
solution of the elastic Boltzmann transport equation.
Phys. Rev. E, 71:041202, 2005.
(10 pages).
[ .pdf ]
An analytical expression of the particle distribution
based on an analytical cumulant solution of the
time-dependent elastic Boltzmann transport equation BTE is
presented. This expression improves upon the previous
second order cumulant solution of the BTE described by a
Gaussian distribution in two aspects: (1) separating the
ballistic component from the scattered component to ensure
that the summation in expressions is convergent; and (2)
enforcing the causality condition to ensure that no
particle travels faster than the free speed of the
particles. Time-resolved profiles obtained using the
analytical form are compared with those obtained by the
Monte Carlo simulation, for both transmission and
backscattering. The calculating time using our analytical
form is much faster than that using the Monte Carlo
approach.
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[11]
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M. Alrubaiee, M. Xu, S. K. Gayen, and R. R. Alfano.
Tomographic imaging of scattering objects in tissue-like turbid media
using independent component analysis.
Appl. Phys. Lett., 87:191112, 2005.
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[12]
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M. Xu.
Electric field Monte Carlo for polarized light propagation in
turbid media.
Opt. Express, 12:6530-6539, 2004.
http://www.opticsexpress.org/abstract.cfm?URI=OPEX-12-26-653.
[ .pdf ]
Electric Field Monte Carlo (EMC) method for simulating
polarized light propagation in turbid media is presented.
Scattering of light by the particle is described by a
rotation of the local coordinate system
(m,n,s) with
m and n the normal and binormal
directions perpendicular to the photon propagation
direction s and an update of the electric field
E=E1m+E2n by the
amplitude scattering matrix. The phase of light is
accumulated according to the optical path. EMC can be used
to study both coherent and incoherent properties of
multiple scattering of light in turbid media. Backscattered
speckle pattern and Muller matrix from a aqueous solution
of polystyrene spheres in a slab geometry are computed by
EMC as examples.
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[13]
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M. Xu, W. Cai, and R. R. Alfano.
Multiple passages of light through an absorption inhomogeneity in
optical imaging of turbid media.
Opt. Lett., 29:1757-1759, 2004.
[ .pdf ]
Multiple passages of light through an absorption
inhomogeneity of finite size deep within a turbid medium
are analyzed for optical imaging by use of the self-energy
diagram. The nonlinear correction becomes more important
for an inhomogeneity of a larger size and with greater
contrast in absorption with respect to the host background.
The nonlinear correction factor agrees well with that from
Monte Carlo simulations for cw light. The correction is
approximately 50%-75% in the near infrared for an
absorption inhomogeneity with the typical optical
properties found in tissues and five times the size of the
transport mean free path.
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[14]
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M. Xu.
Light extinction and absorption by arbitrarily oriented finite
circular cylinders using geometrical path statistics of rays.
Appl. Opt., 42:6710-6723, 2003.
[ .pdf ]
From the geometrical path statistics of rays in an
anomalous-diffraction theory (ADT) Opt. Lett. 28 , 179
(2003) closed-form expressions for the geometrical path
distribution of rays and analytical formulas for the
optical efficiencies of finite circular cylinders oriented
in an arbitrary direction with respect to the incident
light are derived. The characteristics of the shapes of the
cylinders produce unique features in the geometrical path
distributions of the cylinders compared with spheroids.
Gaussian ray approximations, which depend only on the mean
and the mean-squared geometrical paths of rays, of the
optical efficiencies of finite circular cylinders and
spheroids are compared with the exact optical efficiencies
in ADT. The influence of the difference in shape between
cylinders and spheroids on the optical efficiencies in ADT
is illustrated by their respective geometrical path
distributions of rays.
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[15]
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M. Xu, M. Lax, and R. R. Alfano.
Light anomalous diffraction using geometrical path statistics of rays
and gaussian ray approximation.
Opt. Lett, 28:179-181, 2003.
[ .pdf ]
The anomalous-diffraction theory (ADT) of extinction of
light by soft particles is shown to be determined by a
statistical distribution of the geometrical paths of
individual rays inside the particles. Light extinction
depends on the mean and the mean-squared geometrical paths
of the rays. Analytical formulas for optical efficiencies
from a Gaussian distribution of the geometrical paths of
rays are derived. This Gaussian ray approximation reduces
to the exact ADT in the intermediate case of light
scattering for an arbitrary soft particle and describes
well the extinction of light from a system of randomly
oriented and (or) polydisperse particles. The implications
for probing of the sizes and shapes of particles by light
extinction are discussed.
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[16]
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M. Xu and R. R. Alfano.
More on patterns in Mie scattering.
Opt. Comm., 226(1-6):1-5, 2003.
[ .pdf ]
The powerlaw patterns in Mie scattering (the normalized
light intensity I()/I(0) vs. the dimensionless qR where is
the magnitude of the wave vector transfer at the scattering
angle for wavelength , and R is the radius of the
nonabsorbing sphere with a relative refractive index m>1)
are analyzed using the geometrical optics approximation for
particles of a large size parameter. The (qR)?4 powerlaw
regime is shown to be present only in Mie scattering of
soft particles. The (qR)?2 powerlaw regime occurs at the
scattering angles of the p=1 geometrical ray (refracted
without internal reflections) from the portion of the
incident beam with an incidence angle around /4 upon the
particle. The (qR)?2 powerlaw regimes from particles
sharing one common relative refractive index but differing
in size parameters are collinear. Simple analytical
expressions are derived to describe these powerlaw regimes
of Mie scattering.
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[17]
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A. Katz, A. Alimova, M. Xu, E. Rudolph, M. Shah, H. Savage, R. Rosen,
S. A. McCormick, and R. R. Alfano.
Bacteria size determination by elastic light scattering.
IEEE JSTQE, 9:277-287, 2003.
[ .pdf ]
Light extinction and angular scattering measurements were
performed on three species of bacteria with different sizes
and shapes ( Pseudomonas aeruginosa, Staphylococcus aureus,
and Bacillus subtilis). The Gaussian ray approximation of
anomalous diffraction theory was used to determine the
average bacteria size from transmission measurements. A
rescaled spectra combining multiple angular data was
analyzed in the framework of the Rayleigh-Gans theory of
light scattering. Particle shape and size distribution is
then obtained from the rescale spectra. Particle
characteristics (size and/or shape) retrieved from both
methods are in good agreement with size and shape measured
under scanning electron microscopy. These results
demonstrate that light scattering may be able to detect and
identify microbial contamination in the environment.
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[18]
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W. Cai, M. Xu, and R. R. Alfano.
Three dimensional radiative transfer tomography for turbid media.
IEEE JSTQE, 9:189-198, 2003.
[ .pdf ]
The photon distribution, as a function of position, angle,
and time, is computed using the analytical cumulant
solution of the Boltzmann radiative transfer equation
(RTE). A linear forward model for light propagation in
turbid media for three-dimensional (3-D) optical tomography
is formed based on this solution. The model can be used
with time resolved, continuous wave (CW), and
frequency-domain measurements in parallel geometries. This
cumulant forward model (CFM) is more accurate than that
based on the diffusion approximation of RTE. An inverse
algorithm that incorporates this CFM is developed, based on
a fast 3-D hybrid-dual-Fourier tomographic approach using
multiple detectors and multiple sources in parallel
geometries. The inverse algorithm can produce a 3-D image
of a turbid medium with more than 20 000 voxels in 1-2 min
using a personal computer. A 3-D image reconstructed from
simulated data is presented.
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[19]
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M. Xu, W. Cai, M. Lax, and R. R. Alfano.
Photon migration in turbid media using a cumulant approximation to
radiative transfer.
Phys. Rev. E, 65:066609, 2002.
[ .pdf ]
A photon transport model for light migration in turbid
media based on a cumulant approximation to radiative
transfer is presented for image reconstruction inside an
infinite medium or a bounded medium with a planar geometry.
This model treats weak inhomogeneities through a Born
approximation of the Boltzmann radiative transfer equation
and uses the second-order cumulant solution of photon
density to the Boltzmann equation as the Green's function
for the uniform background. It provides the correct
behavior of photon migration at early times and reduces at
long times to the center-moved diffusion approximation. At
early times, it agrees much better with the result from the
Monte Carlo simulation than the diffusion approximation.
Both approximations agree well with the Monte Carlo
simulation at later times. The weight function for image
reconstruction under this proposed model is shown to have a
strong dependence at both early and later times on
absorption and/or scattering inhomogeneities located in the
propagation direction of and close to the source, or in the
field of view of and close to the detector. This effect
originates from the initial ballistic motion of incident
photons, which is substantially underestimated by the
diffusion approximation.
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[20]
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W. Cai, M. Xu, M. Lax, and R. R. Alfano.
Diffusion coefficient depends on time not on absorption.
Opt. Lett., 27(9):731-733, 2002.
[ .pdf ]
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[21]
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M. Xu, M. Lax, and R. R. Alfano.
Time-resolved Fourier optical diffuse tomography.
J. Opt. Soc. Am. A, 18(7):1535-1542, 2001.
[ .pdf ]
Time-resolved Fourier optical diffuse tomography is a
novel approach for imaging of objects in a highly
scattering turbid medium with use of an incident (near)
plane wave. The theory of the propagation of spatial
Fourier components of the scattered wave field is
presented, along with a fast algorithm for
three-dimensional reconstruction in a parallel planar
geometry. Examples of successful reconstructions of
simulated hidden absorptive or scattering objects embedded
inside a human-tissue-like semi-infinite turbid medium are
provided.
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[22]
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M. Xu, W. Cai, M. Lax, and R. R. Alfano.
A photon transport forward model for imaging in turbid media.
Opt. Lett., 26(14):1066-1068, 2001.
[ .pdf ]
A photon-transport forward model for image reconstruction
in turbid media is derived that treats weak inhomogeneities
through a Born approximation of the Boltzmann radiative
transfer equation. This model can conveniently replace the
commonly used diffusion approximation in optical
tomography. An analytical expression of the background
Green's function is obtained from the cumulant solution of
the Boltzmann equation. Our model provides the correct
behavior of photon migration at early times and reduces at
long times to the center-moved diffusion approximation.
Numerical comparisons between this model and the standard
and center-moved diffusion models are presented.
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[23]
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W. Cai, S. K. Gayen, M. Xu, M. Zevallos, M. Alrubaiee, M. Lax, and
R. R. Alfano.
Optical tomographic image reconstruction from ultrafast time-sliced
transmission measurements.
Appl. Opt., 38(19):4237-4246, 1999.
[ .pdf ]
Optical imaging and localization of objects inside a
highly scattering medium, such as a tumor in the breast, is
a challenging problem with many practical applications.
Conventional imaging methods generally provide only
two-dimensional (2-D) images of limited spatial resolution
with little diagnostic ability. Here we present an
inversion algorithm that uses time-resolved
transillumination measurements in the form of a sequence of
picosecond-duration intensity patterns of transmitted
ultrashort light pulses to reconstruct three-dimensional
(3-D) images of an absorbing object located inside a slab
of a highly scattering medium. The experimental arrangement
used a 3-mm-diameter collimated beam of 800-nm, 150-fs,
1-kHz repetition rate light pulses from a Ti:sapphire laser
and amplifier system to illuminate one side of the slab
sample. An ultrafast gated intensified camera system that
provides a minimum FWHM gate width of 80 ps recorded the
2-D intensity patterns of the light transmitted through the
opposite side of the slab. The gate position was varied in
steps of 100 ps over a 5-ns range to obtain a sequence of
2-D transmitted light intensity patterns of both
less-scattered and multiple-scattered light for image
reconstruction. The inversion algorithm is based on the
diffusion approximation of the radiative transfer theory
for photon transport in a turbid medium. It uses a Green s
function perturbative approach under the Rytov
approximation and combines a 2-D matrix inversion with a
one-dimensional Fourier-transform inversion to achieve
speedy 3-D image reconstruction. In addition to the lateral
position, the method provides information about the axial
position of the object as well, whereas the 2-D
reconstruction methods yield only lateral position.
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[24]
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X. Jin, Y. Chen, X. W. Lin, G. S. Dong, M. Xu, W. R. Zhu, X. Wang,
X. L. Shen, and L. Li.
Interface structure of fcc Mn on GaAs(001).
Appl. Phys. Lett., 70(18):2455-2457, 1997.
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[25]
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G. S. Dong, M. Xu, Y. Chen, X. Jin, and Xun Wang.
XPS study of Mn thin films grown on GaAs(001) surfaces.
Surface and Interface Analysis, 24(9):653-656, 1996.
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[26]
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M. Zhang, G. S. Dong, M. Xu, Y. Chen, and X. Jin.
The formation of the meta-stable γ-Mn and GaAs(100)
interface: diffusion and chemical reaction.
Acta Physics Sinica, 46, 1995.
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[27]
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X. Jin, Y. Chen, G. S. Dong, M. Zhang, M. Xu, X. G. Zhu, Xun Wang,
E. D. Lu, H. B. Pan, P. S. Xu, X. Y. Zhang, and C. Y. Fan.
Synchrotron-radiation study of the electronic structure of fcc Mn
thin films grown on GaAs (001) surface.
Phys. Rev. B, 51(15):9702-6, 1995.
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[28]
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M. Zhang, G. S. Dong, X. G. Zhu, M. Xu, and X. Jin.
A photoemission study on the magnetism of Mn/GaAs(100)
interface.
Chinese Journal of Semiconductors, 1994.
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[29]
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X. Jin, M. Zhang, G. S. Dong, M. Xu, Y. Chen, Xun Wang, X. G. Zhu, and
X. L. Shen.
Stabilization of face-centered-cubic Mn films via epitaxial growth
on GaAs(001).
Appl. Phys. Lett., 65(24):3078-80, 1994.
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[30]
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X. Jin, M. Zhang, G. S. Dong, Y. Chen, M. Xu, X. G. Zhu, X. Wang,
E. D. Lu, H. B. Pan, P. S. Xu, X. Y. Zhang, and C. Y. Fan.
Magnetic-ordering of Mn overlayers on GaAs(100).
Phys. Rev. B, 50(13):9585-9588, 1994.
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[31]
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Y. Chen, G. S. Dong, M. Zhang, M. Xu, X. Jin, E. D. Lu, H. B. Fan,
P. S. Xu, X. Y. Zhang, and C. Y. Fan.
The growth of metastable fcc-Mn thin film on GaAs(001) and its
electronic structure studied by photoemission with synchrotron radiation.
Acta Physics Sinica, 1994.
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[32]
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X. G. Zhu, M. Zhang, M. Xu, G. S. Dong, and X. Jin.
Preparation and structural study of a new metastable Mn phase.
Chinese Journal of Semiconductors, 14(11), 1993.
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[33]
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M. Zhang, G. S. Dong, J. S. Li, M. Xu, X. Jin, and Xun Wang.
Preparation and structural study of Mn/GaAs(100) interface.
Acta Physics Sinica, 42(8), 1993.
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